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   Gene Cluster Analysis of Marine Bacteria Seeking For Natural Anticancer Products  
نویسنده Mohamadkhani Ashraf
منبع Jundishapur Journal Of Natural Pharmaceutical Products - 2021 - دوره : 16 - شماره : 4 - صفحه:1 -6
چکیده    Background: in the past decade, metabolites of marine microorganisms have been increasingly used for their various biological activities. an intense effort has been dedicated to assessing the therapeutic efficacy of the marine natural products and metabolites obtained from marine bacteria in cancer therapy. fast and reliable analytical bacterial genome sequencing provides specialized bioinformatic tools to identify potential gene clusters in bacteria for obtaining secondary metabolites. objectives: this study aimed to analyze the genome sequences of marine bacteria to recognize bioactive compounds with anti-cancer properties. methods: marine bacteria with the genomic sequences registered in the national center for biotechnology information (ncbi) genome database were used in this study. the genome was analyzed for proteins, trnas, and rrnas from genbank entries by feature extract 1.2l server. the anti-smash webserver was used for the analysis of unique marine bacterial metabolites of the marine bacterial genome, available from the ncbi database. results: a number of marine bacterial species, including salinispora arenicola, salinispora tropica, crocosphaera watsonii, and blastopirellula marina encoded metabolites belonging to the polyketide and nonribosomal peptide (nrp) families, showing anti-cancer properties. among the marine species described, s. tropica and s. arenicola are richer in the genes encoding polyketide and nrp with potential anti-tumor activities. conclusions: marine bacteria are an excellent and exceptional source of anti-cancer compounds. in silico genome analysis of marine bacteria provided an opportunity to evaluate gene clusters for known natural products. like this chemical engineering approaches for pharmaceutical application are useful in clinical evaluation of cancer treatment.
کلیدواژه Natural Products ,Anti-Smash Web Server ,Cancer ,Secondary Metabolites ,Gene Clusters ,Marine Bacteria
آدرس Tehran University Of Medical Sciences, Liver And Pancreatobiliary Disease Research Center, Digestive Disease Research Institute, Shartati Hospital, Iran
پست الکترونیکی mohamadkhani.ashraf@gmail.com

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